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NCMIR Personnel: contact Rick Lawrence or Alex Kulungowski for using / installing TxBR. Once installed, log onto Confluence and click here if any problems are encountered

Personal Notes regarding TxBR

TxBR 3.0 Command Lines

  • Wiki Markup
    runtxbr.py \[-h\]
    Will run txbr with a single command from alignment all the way to backprojection.  The \-h flag brings up a listing of other useable flags to modify the job protocol.  Use in the data directory. 
  • qsub runtxbr.bash.pbs
    Use on a cluster to submit the .pbs job file.  Modify the .pbs file as necessary.

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